Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm9987-201ENSMUST00000069768 567 ntBASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm10052-201ENSMUST00000168019 960 ntBASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm18032-201ENSMUST00000222541 538 ntBASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm7729-201ENSMUST00000050143 801 ntBASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav21-dv12A0A075B6C4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms