Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Gm5874-201ENSMUST00000096101 508 ntBASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav6-5A0A075B6B5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Gm10849-201ENSMUST00000100397 618 ntBASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6-5A0A075B6B5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav6-5A0A075B6B5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms