Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav17A0A075B655 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav17A0A075B655 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Gm29707-201ENSMUST00000196325 491 ntBASIC12.62□□□□□ -0.39
Trav17A0A075B655 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.62□□□□□ -0.39
Trav17A0A075B655 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.62□□□□□ -0.39
Trav17A0A075B655 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav17A0A075B655 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms