Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Prob1-201ENSMUST00000097619 3021 ntBASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H2afb1S4R1E0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gm13559-201ENSMUST00000120476 863 ntBASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gm26039-201ENSMUST00000158152 144 ntBASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gm36967-201ENSMUST00000193814 266 ntBASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb1S4R1E0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.42□□□□□ -0.1
H2afb1S4R1E0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Gm18959-201ENSMUST00000208954 655 ntBASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Gm10566-201ENSMUST00000086739 996 ntBASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb1S4R1E0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms