Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smarcb1Q9Z0H3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcb1Q9Z0H3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Gm15467-201ENSMUST00000120582 445 ntBASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Gm5682-201ENSMUST00000173402 505 ntBASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcb1Q9Z0H3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Gm11779-201ENSMUST00000118541 368 ntBASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Gm9727-201ENSMUST00000161387 555 ntBASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcb1Q9Z0H3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Gm18489-201ENSMUST00000172565 551 ntBASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Gm37935-201ENSMUST00000192012 982 ntBASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms