Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Gm12527-201ENSMUST00000117967 564 ntBASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cx3cr1Q9Z0D9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Mir1199-201ENSMUST00000117015 119 ntBASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Gm11539-201ENSMUST00000119837 557 ntBASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Gm18421-201ENSMUST00000204122 625 ntBASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Odf3b-204ENSMUST00000227834 930 ntBASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cx3cr1Q9Z0D9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cx3cr1Q9Z0D9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.46□□□□□ -0.25
Cx3cr1Q9Z0D9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cx3cr1Q9Z0D9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms