Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn2Q9R0A1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Mir770-201ENSMUST00000103252 94 ntBASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Gm33142-201ENSMUST00000193913 867 ntBASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn2Q9R0A1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Clcn2Q9R0A1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn2Q9R0A1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Clcn2Q9R0A1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn2Q9R0A1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn2Q9R0A1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn2Q9R0A1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn2Q9R0A1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn2Q9R0A1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Gm17808-201ENSMUST00000200859 894 ntBASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.26■□□□□ 0.19
Clcn2Q9R0A1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn2Q9R0A1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clcn2Q9R0A1 Gm36967-201ENSMUST00000193814 266 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms