Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn11aQ9R053 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Scn11aQ9R053 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.7■□□□□ 0.58
Scn11aQ9R053 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn11aQ9R053 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn11aQ9R053 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn11aQ9R053 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.69■□□□□ 0.58
Scn11aQ9R053 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Scn11aQ9R053 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Gm27301-201ENSMUST00000184012 127 ntBASIC18.68■□□□□ 0.58
Scn11aQ9R053 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.68■□□□□ 0.58
Scn11aQ9R053 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.68■□□□□ 0.58
Scn11aQ9R053 Thap2-203ENSMUST00000218989 527 ntBASIC18.68■□□□□ 0.58
Scn11aQ9R053 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scn11aQ9R053 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.67■□□□□ 0.58
Scn11aQ9R053 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn11aQ9R053 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Gm43125-201ENSMUST00000201724 730 ntBASIC18.66■□□□□ 0.58
Scn11aQ9R053 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn11aQ9R053 Gm45612-201ENSMUST00000211320 160 ntBASIC18.66■□□□□ 0.58
Scn11aQ9R053 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms