Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Gm8097-201ENSMUST00000117903 829 ntBASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Gm18622-201ENSMUST00000219361 595 ntBASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Gm8655-201ENSMUST00000221159 852 ntBASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Dancr-204ENSMUST00000132389 2347 ntBASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Phtf1Q9QZ09 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Gm11452-201ENSMUST00000122376 690 ntBASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.41■□□□□ 0.38
Phtf1Q9QZ09 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Gm13884-201ENSMUST00000118103 829 ntBASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Gm11780-201ENSMUST00000136880 516 ntBASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Phtf1Q9QZ09 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Phtf1Q9QZ09 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Phtf1Q9QZ09 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Phtf1Q9QZ09 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Phtf1Q9QZ09 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms