Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nup50Q9JIH2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.79■□□□□ 0.28
Nup50Q9JIH2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Nup50Q9JIH2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nup50Q9JIH2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup50Q9JIH2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Nup50Q9JIH2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Gm11950-201ENSMUST00000121615 838 ntBASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.76■□□□□ 0.27
Nup50Q9JIH2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup50Q9JIH2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms