Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rtp4Q9ER80 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Rtp4Q9ER80 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.89□□□□□ -0.03
Rtp4Q9ER80 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Rtp4Q9ER80 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.88□□□□□ -0.03
Rtp4Q9ER80 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Gm12644-201ENSMUST00000119935 606 ntBASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Gm44430-201ENSMUST00000203376 995 ntBASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rtp4Q9ER80 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Gm27867-201ENSMUST00000184778 125 ntBASIC14.86□□□□□ -0.03
Rtp4Q9ER80 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rtp4Q9ER80 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.85□□□□□ -0.03
Rtp4Q9ER80 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms