Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Gm13884-201ENSMUST00000118103 829 ntBASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Gm12644-201ENSMUST00000119935 606 ntBASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cdc40Q9DC48 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.74□□□□□ -0.05
Cdc40Q9DC48 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cdc40Q9DC48 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.73□□□□□ -0.05
Cdc40Q9DC48 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.73□□□□□ -0.05
Cdc40Q9DC48 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cdc40Q9DC48 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.72□□□□□ -0.05
Cdc40Q9DC48 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms