Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
U2af1Q9D883 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
U2af1Q9D883 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
U2af1Q9D883 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
U2af1Q9D883 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
U2af1Q9D883 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
U2af1Q9D883 Gm6257-201ENSMUST00000163864 910 ntBASIC20.87■□□□□ 0.93
U2af1Q9D883 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.87■□□□□ 0.93
U2af1Q9D883 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.87■□□□□ 0.93
U2af1Q9D883 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1Q9D883 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.86■□□□□ 0.93
U2af1Q9D883 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.86■□□□□ 0.93
U2af1Q9D883 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
U2af1Q9D883 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
U2af1Q9D883 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
U2af1Q9D883 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
U2af1Q9D883 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
U2af1Q9D883 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
U2af1Q9D883 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1Q9D883 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
U2af1Q9D883 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
U2af1Q9D883 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
U2af1Q9D883 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.85■□□□□ 0.93
U2af1Q9D883 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Gm10060-201ENSMUST00000212002 111 ntBASIC20.85■□□□□ 0.93
U2af1Q9D883 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.85■□□□□ 0.93
U2af1Q9D883 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1Q9D883 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
U2af1Q9D883 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.84■□□□□ 0.93
U2af1Q9D883 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.84■□□□□ 0.93
U2af1Q9D883 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Gm44771-201ENSMUST00000206975 626 ntBASIC20.84■□□□□ 0.93
U2af1Q9D883 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.84■□□□□ 0.93
U2af1Q9D883 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
U2af1Q9D883 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1Q9D883 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2af1Q9D883 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
U2af1Q9D883 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2af1Q9D883 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms