Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chaf1bQ9D0N7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chaf1bQ9D0N7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chaf1bQ9D0N7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chaf1bQ9D0N7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms