Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.71■□□□□ 0.75
Nip7Q9CXK8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Gm11025-201ENSMUST00000140773 466 ntBASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.7■□□□□ 0.74
Nip7Q9CXK8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nip7Q9CXK8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.69■□□□□ 0.74
Nip7Q9CXK8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nip7Q9CXK8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Gm7063-201ENSMUST00000186840 981 ntBASIC19.68■□□□□ 0.74
Nip7Q9CXK8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Gm8396-201ENSMUST00000057361 823 ntBASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nip7Q9CXK8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.68■□□□□ 0.74
Nip7Q9CXK8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms