Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RTRAFQ9CQE8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Gm4968-201ENSMUST00000071458 858 ntBASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RTRAFQ9CQE8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Gm17661-201ENSMUST00000170317 270 ntBASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Gm37025-201ENSMUST00000195159 829 ntBASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Gm5874-201ENSMUST00000096101 508 ntBASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RTRAFQ9CQE8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTRAFQ9CQE8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTRAFQ9CQE8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RTRAFQ9CQE8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTRAFQ9CQE8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTRAFQ9CQE8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTRAFQ9CQE8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTRAFQ9CQE8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RTRAFQ9CQE8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms