Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Gm8520-201ENSMUST00000186517 868 ntBASIC14.37□□□□□ -0.11
Krt88Q9CPR6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt88Q9CPR6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Gm10698-201ENSMUST00000182663 604 ntBASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Timm23-208ENSMUST00000226683 750 ntBASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt88Q9CPR6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Krt88Q9CPR6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Krt88Q9CPR6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms