Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Gm15693-201ENSMUST00000120470 637 ntBASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.09■□□□□ 0.17
Cdh23Q99PF4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Gm9899-201ENSMUST00000065519 555 ntBASIC16.09■□□□□ 0.17
Cdh23Q99PF4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh23Q99PF4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Cdh23Q99PF4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh23Q99PF4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh23Q99PF4 Gm44855-201ENSMUST00000205725 362 ntBASIC16.08■□□□□ 0.17
Cdh23Q99PF4 Gm44719-201ENSMUST00000206404 149 ntBASIC16.08■□□□□ 0.17
Cdh23Q99PF4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh23Q99PF4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.08■□□□□ 0.17
Cdh23Q99PF4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh23Q99PF4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Gm14928-201ENSMUST00000120198 477 ntBASIC16.08■□□□□ 0.16
Cdh23Q99PF4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh23Q99PF4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Gm24158-201ENSMUST00000175263 71 ntBASIC16.07■□□□□ 0.16
Cdh23Q99PF4 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Gm7787-201ENSMUST00000216858 688 ntBASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdh23Q99PF4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm27989-201ENSMUST00000184721 107 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm4518-201ENSMUST00000182638 718 ntBASIC16.06■□□□□ 0.16
Cdh23Q99PF4 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms