Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Gm45167-201ENSMUST00000208007 322 ntBASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.84■□□□□ 0.13
Cstf1Q99LC2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cstf1Q99LC2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cstf1Q99LC2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
Cstf1Q99LC2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Cstf1Q99LC2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cstf1Q99LC2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 AA543401-201ENSMUST00000164248 1269 ntBASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cstf1Q99LC2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Gm13616-201ENSMUST00000120600 222 ntBASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cstf1Q99LC2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Gm27300-201ENSMUST00000184085 97 ntBASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Gm27335-201ENSMUST00000184758 97 ntBASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms