Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha9Q91Y11 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha9Q91Y11 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Gm4459-201ENSMUST00000118750 468 ntBASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Gm34391-201ENSMUST00000203706 907 ntBASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.88■□□□□ 0.29
Pcdha9Q91Y11 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha9Q91Y11 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Gm17971-201ENSMUST00000190239 806 ntBASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Gm8655-201ENSMUST00000221159 852 ntBASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha9Q91Y11 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.85■□□□□ 0.29
Pcdha9Q91Y11 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms