Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhga3Q91XY5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Mir770-201ENSMUST00000103252 94 ntBASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Gm6659-201ENSMUST00000174752 547 ntBASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Gm36967-201ENSMUST00000193814 266 ntBASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhga3Q91XY5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Gm23634-201ENSMUST00000175071 91 ntBASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhga3Q91XY5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga3Q91XY5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga3Q91XY5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdhga3Q91XY5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga3Q91XY5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga3Q91XY5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhga3Q91XY5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms