Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga9Q91XX9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga9Q91XX9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.71■□□□□ 0.1
Pcdhga9Q91XX9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.71■□□□□ 0.1
Pcdhga9Q91XX9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Pcdhga9Q91XX9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga9Q91XX9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga9Q91XX9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga9Q91XX9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga9Q91XX9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Gm11452-201ENSMUST00000122376 690 ntBASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga9Q91XX9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms