Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.17■□□□□ 0.5
Trex1Q91XB0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trex1Q91XB0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.16■□□□□ 0.5
Trex1Q91XB0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Gm9682-201ENSMUST00000197505 556 ntBASIC18.16■□□□□ 0.5
Trex1Q91XB0 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.16■□□□□ 0.5
Trex1Q91XB0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trex1Q91XB0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.15■□□□□ 0.5
Trex1Q91XB0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trex1Q91XB0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trex1Q91XB0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trex1Q91XB0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trex1Q91XB0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Trex1Q91XB0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.14■□□□□ 0.49
Trex1Q91XB0 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.14■□□□□ 0.49
Trex1Q91XB0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trex1Q91XB0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.14■□□□□ 0.49
Trex1Q91XB0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.14■□□□□ 0.49
Trex1Q91XB0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Gm18489-201ENSMUST00000172565 551 ntBASIC18.13■□□□□ 0.49
Trex1Q91XB0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Gm7787-201ENSMUST00000216858 688 ntBASIC18.13■□□□□ 0.49
Trex1Q91XB0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trex1Q91XB0 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.13■□□□□ 0.49
Trex1Q91XB0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.13■□□□□ 0.49
Trex1Q91XB0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms