Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sh3d19Q91X43 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Gm6443-201ENSMUST00000203599 874 ntBASIC16.52■□□□□ 0.24
Sh3d19Q91X43 AV026068-213ENSMUST00000223675 1171 ntBASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sh3d19Q91X43 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Sh3d19Q91X43 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.52■□□□□ 0.23
Sh3d19Q91X43 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d19Q91X43 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d19Q91X43 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.52■□□□□ 0.23
Sh3d19Q91X43 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d19Q91X43 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Sh3d19Q91X43 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sh3d19Q91X43 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sh3d19Q91X43 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Gm7222-201ENSMUST00000117512 906 ntBASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Gm8344-201ENSMUST00000119813 856 ntBASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Gm1401-201ENSMUST00000122048 772 ntBASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.5■□□□□ 0.23
Sh3d19Q91X43 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Gm43514-201ENSMUST00000198852 424 ntBASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.5■□□□□ 0.23
Sh3d19Q91X43 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.5■□□□□ 0.23
Sh3d19Q91X43 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3d19Q91X43 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3d19Q91X43 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3d19Q91X43 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3d19Q91X43 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sh3d19Q91X43 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3d19Q91X43 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3d19Q91X43 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.49■□□□□ 0.23
Sh3d19Q91X43 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms