Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Gm6443-201ENSMUST00000203599 874 ntBASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx41Q91VN6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.19■□□□□ 0.5
Ddx41Q91VN6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Ddx41Q91VN6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Gm18195-201ENSMUST00000207604 706 ntBASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx41Q91VN6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44357-201ENSMUST00000195897 142 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm19658-201ENSMUST00000196231 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44367-201ENSMUST00000196836 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44350-201ENSMUST00000197197 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44390-201ENSMUST00000197533 144 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44313-201ENSMUST00000198018 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44486-201ENSMUST00000198508 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm43514-201ENSMUST00000198852 424 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44314-201ENSMUST00000199263 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44394-201ENSMUST00000199558 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44484-201ENSMUST00000199873 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44466-201ENSMUST00000200264 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gm44359-201ENSMUST00000200671 138 ntBASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ddx41Q91VN6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx41Q91VN6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms