Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cspg4Q8VHY0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Gm8969-201ENSMUST00000199694 526 ntBASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cspg4Q8VHY0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Mir1938-201ENSMUST00000158746 100 ntBASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cspg4Q8VHY0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Gm13365-201ENSMUST00000121188 973 ntBASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Rprl2-201ENSMUST00000157150 290 ntBASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cspg4Q8VHY0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms