Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdhr1Q8VHP6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Gm8000-201ENSMUST00000188378 592 ntBASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdhr1Q8VHP6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Gm7222-201ENSMUST00000117512 906 ntBASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Gm18622-201ENSMUST00000219361 595 ntBASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Dancr-204ENSMUST00000132389 2347 ntBASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdhr1Q8VHP6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cdhr1Q8VHP6 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms