Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Gm11594-201ENSMUST00000122313 162 ntBASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Gm2213-201ENSMUST00000197485 688 ntBASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Gm6376-201ENSMUST00000209407 580 ntBASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.38■□□□□ 0.05
Cdt1Q8R4E9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Gm8000-201ENSMUST00000188378 592 ntBASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdt1Q8R4E9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdt1Q8R4E9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cdt1Q8R4E9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms