Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Treml1Q8K558 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.66■□□□□ 0.1
Treml1Q8K558 Gm12644-201ENSMUST00000119935 606 ntBASIC15.66■□□□□ 0.1
Treml1Q8K558 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.66■□□□□ 0.1
Treml1Q8K558 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.66■□□□□ 0.1
Treml1Q8K558 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.66■□□□□ 0.1
Treml1Q8K558 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
Treml1Q8K558 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.66■□□□□ 0.1
Treml1Q8K558 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Treml1Q8K558 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Treml1Q8K558 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Treml1Q8K558 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Treml1Q8K558 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.65■□□□□ 0.1
Treml1Q8K558 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.65■□□□□ 0.1
Treml1Q8K558 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Treml1Q8K558 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.65■□□□□ 0.1
Treml1Q8K558 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Treml1Q8K558 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Treml1Q8K558 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.65■□□□□ 0.1
Treml1Q8K558 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Treml1Q8K558 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Treml1Q8K558 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.64■□□□□ 0.09
Treml1Q8K558 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Treml1Q8K558 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.64■□□□□ 0.09
Treml1Q8K558 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 App-207ENSMUST00000227737 2827 ntBASIC15.64■□□□□ 0.09
Treml1Q8K558 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Treml1Q8K558 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.63■□□□□ 0.09
Treml1Q8K558 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Mir6404-201ENSMUST00000183699 94 ntBASIC15.63■□□□□ 0.09
Treml1Q8K558 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.63■□□□□ 0.09
Treml1Q8K558 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.63■□□□□ 0.09
Treml1Q8K558 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Treml1Q8K558 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Treml1Q8K558 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Treml1Q8K558 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Treml1Q8K558 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Treml1Q8K558 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Treml1Q8K558 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms