Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.06■□□□□ 0.16
Clip4Q8CI96 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Clip4Q8CI96 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Gm18421-201ENSMUST00000204122 625 ntBASIC16.06■□□□□ 0.16
Clip4Q8CI96 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clip4Q8CI96 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Ank2-226ENSMUST00000189368 339 ntBASIC16.05■□□□□ 0.16
Clip4Q8CI96 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clip4Q8CI96 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.04■□□□□ 0.16
Clip4Q8CI96 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.04■□□□□ 0.16
Clip4Q8CI96 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.04■□□□□ 0.16
Clip4Q8CI96 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clip4Q8CI96 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.03■□□□□ 0.16
Clip4Q8CI96 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Clip4Q8CI96 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.02■□□□□ 0.16
Clip4Q8CI96 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.02■□□□□ 0.16
Clip4Q8CI96 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Clip4Q8CI96 Gm27742-201ENSMUST00000184667 60 ntBASIC16.02■□□□□ 0.16
Clip4Q8CI96 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms