Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc60Q8C4J0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc60Q8C4J0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc60Q8C4J0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Gm9172-201ENSMUST00000212092 954 ntBASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Birc2-201ENSMUST00000054878 378 ntBASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc60Q8C4J0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc60Q8C4J0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Gm6257-201ENSMUST00000163864 910 ntBASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc60Q8C4J0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc60Q8C4J0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Gm4459-201ENSMUST00000118750 468 ntBASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc60Q8C4J0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc60Q8C4J0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms