Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf2Q8BZT2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sh3rf2Q8BZT2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf2Q8BZT2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf2Q8BZT2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf2Q8BZT2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf2Q8BZT2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf2Q8BZT2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Sh3rf2Q8BZT2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf2Q8BZT2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf2Q8BZT2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf2Q8BZT2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf2Q8BZT2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Gm15467-201ENSMUST00000120582 445 ntBASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3rf2Q8BZT2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Gm8344-201ENSMUST00000119813 856 ntBASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3rf2Q8BZT2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Gm6257-201ENSMUST00000163864 910 ntBASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Gm5682-201ENSMUST00000173402 505 ntBASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3rf2Q8BZT2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sh3rf2Q8BZT2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms