Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip4Q8BQP8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Gm15372-201ENSMUST00000120729 834 ntBASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip4Q8BQP8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.58■□□□□ 0.41
Rab11fip4Q8BQP8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Rprl3-201ENSMUST00000157400 290 ntBASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip4Q8BQP8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Gm13884-201ENSMUST00000118103 829 ntBASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip4Q8BQP8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.56■□□□□ 0.4
Rab11fip4Q8BQP8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms