Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdhr3Q8BL00 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Gm13559-201ENSMUST00000120476 863 ntBASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdhr3Q8BL00 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Mir5130-201ENSMUST00000175160 84 ntBASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdhr3Q8BL00 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Gm27011-201ENSMUST00000182352 972 ntBASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdhr3Q8BL00 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms