Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim23Q8BGX0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm6257-201ENSMUST00000163864 910 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm8825-201ENSMUST00000182565 998 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm4518-201ENSMUST00000182638 718 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Mir8098-201ENSMUST00000184011 137 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm28659-201ENSMUST00000188013 759 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm5864-201ENSMUST00000202263 970 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim23Q8BGX0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim23Q8BGX0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms