Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Samm50Q8BGH2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Gm44450-201ENSMUST00000199528 114 ntBASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Gm18421-201ENSMUST00000204122 625 ntBASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Gm45328-201ENSMUST00000210942 917 ntBASIC18.66■□□□□ 0.58
Samm50Q8BGH2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.66■□□□□ 0.58
Samm50Q8BGH2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samm50Q8BGH2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.64■□□□□ 0.58
Samm50Q8BGH2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Samm50Q8BGH2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Samm50Q8BGH2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samm50Q8BGH2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Gm29707-201ENSMUST00000196325 491 ntBASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Samm50Q8BGH2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samm50Q8BGH2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms