Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim50Q810I2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim50Q810I2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Trim50Q810I2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim50Q810I2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim50Q810I2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.5■□□□□ 0.07
Trim50Q810I2 Mir3081-201ENSMUST00000175305 84 ntBASIC15.5■□□□□ 0.07
Trim50Q810I2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim50Q810I2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim50Q810I2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim50Q810I2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim50Q810I2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.49■□□□□ 0.07
Trim50Q810I2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.49■□□□□ 0.07
Trim50Q810I2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim50Q810I2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.49■□□□□ 0.07
Trim50Q810I2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trim50Q810I2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim50Q810I2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trim50Q810I2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trim50Q810I2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trim50Q810I2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.48■□□□□ 0.07
Trim50Q810I2 Mir6404-201ENSMUST00000183699 94 ntBASIC15.48■□□□□ 0.07
Trim50Q810I2 Gm27357-201ENSMUST00000183754 135 ntBASIC15.48■□□□□ 0.07
Trim50Q810I2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim50Q810I2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Trim50Q810I2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim50Q810I2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim50Q810I2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.47■□□□□ 0.07
Trim50Q810I2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trim50Q810I2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trim50Q810I2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trim50Q810I2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.47■□□□□ 0.07
Trim50Q810I2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim50Q810I2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms