Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Gm9727-201ENSMUST00000161387 555 ntBASIC15.15■□□□□ 0.02
Vrk1Q80X41 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.15■□□□□ 0.02
Vrk1Q80X41 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.14■□□□□ 0.01
Vrk1Q80X41 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vrk1Q80X41 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.13■□□□□ 0.01
Vrk1Q80X41 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.13■□□□□ 0.01
Vrk1Q80X41 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.13■□□□□ 0.01
Vrk1Q80X41 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vrk1Q80X41 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Gm2756-201ENSMUST00000195851 400 ntBASIC15.13■□□□□ 0.01
Vrk1Q80X41 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.13■□□□□ 0.01
Vrk1Q80X41 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Gm18622-201ENSMUST00000219361 595 ntBASIC15.13■□□□□ 0.01
Vrk1Q80X41 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vrk1Q80X41 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.12■□□□□ 0.01
Vrk1Q80X41 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.12■□□□□ 0.01
Vrk1Q80X41 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.12■□□□□ 0.01
Vrk1Q80X41 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.12■□□□□ 0.01
Vrk1Q80X41 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.12■□□□□ 0.01
Vrk1Q80X41 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vrk1Q80X41 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.11■□□□□ 0.01
Vrk1Q80X41 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vrk1Q80X41 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms