Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.06■□□□□ 0.64
Sned1Q70E20 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.06■□□□□ 0.64
Sned1Q70E20 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Sned1Q70E20 Gm28630-201ENSMUST00000187806 498 ntBASIC19.06■□□□□ 0.64
Sned1Q70E20 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.06■□□□□ 0.64
Sned1Q70E20 Gm9794-201ENSMUST00000202370 423 ntBASIC19.06■□□□□ 0.64
Sned1Q70E20 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sned1Q70E20 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sned1Q70E20 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Sned1Q70E20 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Gm13015-201ENSMUST00000118674 204 ntBASIC19.05■□□□□ 0.64
Sned1Q70E20 Gm44855-201ENSMUST00000205725 362 ntBASIC19.05■□□□□ 0.64
Sned1Q70E20 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.05■□□□□ 0.64
Sned1Q70E20 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sned1Q70E20 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.04■□□□□ 0.64
Sned1Q70E20 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sned1Q70E20 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Sned1Q70E20 Gm16215-201ENSMUST00000161990 637 ntBASIC19.04■□□□□ 0.64
Sned1Q70E20 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 Gm25144-201ENSMUST00000179561 110 ntBASIC19.04■□□□□ 0.64
Sned1Q70E20 Gm25352-201ENSMUST00000179815 110 ntBASIC19.04■□□□□ 0.64
Sned1Q70E20 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.04■□□□□ 0.64
Sned1Q70E20 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.04■□□□□ 0.64
Sned1Q70E20 Gm9063-201ENSMUST00000223299 582 ntBASIC19.04■□□□□ 0.64
Sned1Q70E20 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sned1Q70E20 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.04■□□□□ 0.64
Sned1Q70E20 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Sned1Q70E20 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.04■□□□□ 0.64
Sned1Q70E20 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sned1Q70E20 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.03■□□□□ 0.64
Sned1Q70E20 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.03■□□□□ 0.64
Sned1Q70E20 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.03■□□□□ 0.64
Sned1Q70E20 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.03■□□□□ 0.64
Sned1Q70E20 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sned1Q70E20 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sned1Q70E20 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sned1Q70E20 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.03■□□□□ 0.64
Sned1Q70E20 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sned1Q70E20 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Sned1Q70E20 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sned1Q70E20 Gm27680-201ENSMUST00000184192 160 ntBASIC19.02■□□□□ 0.64
Sned1Q70E20 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.02■□□□□ 0.64
Sned1Q70E20 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.02■□□□□ 0.64
Sned1Q70E20 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sned1Q70E20 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sned1Q70E20 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Sned1Q70E20 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.02■□□□□ 0.63
Sned1Q70E20 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sned1Q70E20 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sned1Q70E20 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Sned1Q70E20 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sned1Q70E20 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms