Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Gm5866-201ENSMUST00000177881 973 ntBASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Gm10253-201ENSMUST00000194270 940 ntBASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nup188Q6ZQH8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup188Q6ZQH8 Gm25287-201ENSMUST00000103846 110 ntBASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Gm22918-201ENSMUST00000103855 110 ntBASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Gm7774-201ENSMUST00000200064 533 ntBASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Gm10154-201ENSMUST00000084445 354 ntBASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup188Q6ZQH8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nup188Q6ZQH8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nup188Q6ZQH8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms