Protein–RNA interactions for Protein: Q6PIC6

Atp1a3, Sodium/potassium-transporting ATPase subunit alpha-3, mousemouse

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp1a3Q6PIC6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atp1a3Q6PIC6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Asic1-205ENSMUST00000228185 1818 ntBASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atp1a3Q6PIC6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Gm10231-201ENSMUST00000181584 441 ntBASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Gm10175-202ENSMUST00000208752 441 ntBASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atp1a3Q6PIC6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Gm10013-201ENSMUST00000106074 672 ntBASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Gm6345-202ENSMUST00000180900 204 ntBASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp1a3Q6PIC6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Atp1a3Q6PIC6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp1a3Q6PIC6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp1a3Q6PIC6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp1a3Q6PIC6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp1a3Q6PIC6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms