Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Gm27741-201ENSMUST00000185060 237 ntBASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Prob1-201ENSMUST00000097619 3021 ntBASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Gm13312-201ENSMUST00000119631 718 ntBASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
Smarcc2Q6PDG5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcc2Q6PDG5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcc2Q6PDG5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.52■□□□□ 0.55
Smarcc2Q6PDG5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Smarcc2Q6PDG5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Smarcc2Q6PDG5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcc2Q6PDG5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcc2Q6PDG5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Gm12895-201ENSMUST00000122214 226 ntBASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcc2Q6PDG5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Rprl3-201ENSMUST00000157400 290 ntBASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.5■□□□□ 0.55
Smarcc2Q6PDG5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 App-207ENSMUST00000227737 2827 ntBASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcc2Q6PDG5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms