Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Mir1668-201ENSMUST00000184114 107 ntBASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcd3Q6P9Z1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Gm26039-201ENSMUST00000158152 144 ntBASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Smarcd3Q6P9Z1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Gm13559-201ENSMUST00000120476 863 ntBASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd3Q6P9Z1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms