Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Gm37055-201ENSMUST00000191866 133 ntBASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.81■□□□□ 0.44
Tpm4Q6IRU2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Gm29707-201ENSMUST00000196325 491 ntBASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tpm4Q6IRU2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.79■□□□□ 0.44
Tpm4Q6IRU2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tpm4Q6IRU2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Asic1-205ENSMUST00000228185 1818 ntBASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Gm36967-201ENSMUST00000193814 266 ntBASIC17.77■□□□□ 0.44
Tpm4Q6IRU2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms