Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.93■□□□□ 0.3
Six2Q62232 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.93■□□□□ 0.3
Six2Q62232 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Gm7284-201ENSMUST00000131667 944 ntBASIC16.93■□□□□ 0.3
Six2Q62232 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Gm33142-201ENSMUST00000193913 867 ntBASIC16.93■□□□□ 0.3
Six2Q62232 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Six2Q62232 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.93■□□□□ 0.3
Six2Q62232 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six2Q62232 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Six2Q62232 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.92■□□□□ 0.3
Six2Q62232 Rprl3-201ENSMUST00000157400 290 ntBASIC16.92■□□□□ 0.3
Six2Q62232 Gm44454-201ENSMUST00000198541 138 ntBASIC16.92■□□□□ 0.3
Six2Q62232 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.92■□□□□ 0.3
Six2Q62232 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.92■□□□□ 0.3
Six2Q62232 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.92■□□□□ 0.3
Six2Q62232 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Six2Q62232 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Six2Q62232 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.91■□□□□ 0.3
Six2Q62232 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Six2Q62232 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Six2Q62232 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Six2Q62232 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Six2Q62232 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.91■□□□□ 0.3
Six2Q62232 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.91■□□□□ 0.3
Six2Q62232 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.91■□□□□ 0.3
Six2Q62232 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.91■□□□□ 0.3
Six2Q62232 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.91■□□□□ 0.3
Six2Q62232 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Six2Q62232 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.9■□□□□ 0.3
Six2Q62232 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.9■□□□□ 0.3
Six2Q62232 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.9■□□□□ 0.3
Six2Q62232 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.9■□□□□ 0.3
Six2Q62232 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Six2Q62232 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Six2Q62232 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Six2Q62232 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Six2Q62232 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six2Q62232 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six2Q62232 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Six2Q62232 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.89■□□□□ 0.3
Six2Q62232 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Six2Q62232 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Six2Q62232 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms