Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ctr9Q62018 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ctr9Q62018 Gm18733-201ENSMUST00000173950 856 ntBASIC18.7■□□□□ 0.58
Ctr9Q62018 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.7■□□□□ 0.58
Ctr9Q62018 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Gm18622-201ENSMUST00000219361 595 ntBASIC18.7■□□□□ 0.58
Ctr9Q62018 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ctr9Q62018 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Ctr9Q62018 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ctr9Q62018 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ctr9Q62018 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ctr9Q62018 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ctr9Q62018 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ctr9Q62018 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ctr9Q62018 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.69■□□□□ 0.58
Ctr9Q62018 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctr9Q62018 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctr9Q62018 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctr9Q62018 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctr9Q62018 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctr9Q62018 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctr9Q62018 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.69■□□□□ 0.58
Ctr9Q62018 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctr9Q62018 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.68■□□□□ 0.58
Ctr9Q62018 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.68■□□□□ 0.58
Ctr9Q62018 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Ctr9Q62018 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ctr9Q62018 Mir5131-201ENSMUST00000175426 93 ntBASIC18.68■□□□□ 0.58
Ctr9Q62018 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Gm2651-201ENSMUST00000203560 838 ntBASIC18.68■□□□□ 0.58
Ctr9Q62018 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.68■□□□□ 0.58
Ctr9Q62018 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ctr9Q62018 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.68■□□□□ 0.58
Ctr9Q62018 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ctr9Q62018 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ctr9Q62018 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctr9Q62018 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
Ctr9Q62018 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.67■□□□□ 0.58
Ctr9Q62018 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.67■□□□□ 0.58
Ctr9Q62018 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.67■□□□□ 0.58
Ctr9Q62018 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Ctr9Q62018 Gm6089-201ENSMUST00000197666 938 ntBASIC18.67■□□□□ 0.58
Ctr9Q62018 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ctr9Q62018 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctr9Q62018 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.67■□□□□ 0.58
Ctr9Q62018 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Gm7230-201ENSMUST00000173026 815 ntBASIC18.66■□□□□ 0.58
Ctr9Q62018 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.66■□□□□ 0.58
Ctr9Q62018 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ctr9Q62018 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.66■□□□□ 0.58
Ctr9Q62018 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctr9Q62018 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ctr9Q62018 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.65■□□□□ 0.58
Ctr9Q62018 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms