Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim25Q61510 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.28■□□□□ 0.36
Trim25Q61510 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim25Q61510 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim25Q61510 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trim25Q61510 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim25Q61510 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim25Q61510 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim25Q61510 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim25Q61510 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trim25Q61510 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Gm12085-201ENSMUST00000119263 940 ntBASIC17.27■□□□□ 0.36
Trim25Q61510 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim25Q61510 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim25Q61510 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim25Q61510 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim25Q61510 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim25Q61510 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim25Q61510 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim25Q61510 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trim25Q61510 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim25Q61510 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim25Q61510 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim25Q61510 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim25Q61510 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim25Q61510 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim25Q61510 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim25Q61510 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim25Q61510 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim25Q61510 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim25Q61510 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim25Q61510 Il3ra-202ENSMUST00000223589 738 ntBASIC17.26■□□□□ 0.35
Trim25Q61510 BC037039-201ENSMUST00000192003 2205 ntBASIC17.26■□□□□ 0.35
Trim25Q61510 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim25Q61510 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim25Q61510 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim25Q61510 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim25Q61510 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.26■□□□□ 0.35
Trim25Q61510 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.26■□□□□ 0.35
Trim25Q61510 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim25Q61510 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim25Q61510 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trim25Q61510 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.26■□□□□ 0.35
Trim25Q61510 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim25Q61510 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim25Q61510 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.25■□□□□ 0.35
Trim25Q61510 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim25Q61510 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim25Q61510 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim25Q61510 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim25Q61510 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim25Q61510 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim25Q61510 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms