Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf1Q5U4C3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scaf1Q5U4C3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Scaf1Q5U4C3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Thap2-203ENSMUST00000218989 527 ntBASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf1Q5U4C3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf1Q5U4C3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Gm12008-201ENSMUST00000117791 755 ntBASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Gm18246-201ENSMUST00000221023 728 ntBASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf1Q5U4C3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scaf1Q5U4C3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Gm44872-201ENSMUST00000207864 420 ntBASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scaf1Q5U4C3 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scaf1Q5U4C3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms