Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Gm6257-201ENSMUST00000163864 910 ntBASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps54Q5SPW0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Vps54Q5SPW0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Gm25990-201ENSMUST00000102440 86 ntBASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Grk6-207ENSMUST00000225925 2769 ntBASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps54Q5SPW0 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps54Q5SPW0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps54Q5SPW0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps54Q5SPW0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms