Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8d-1Q5R1H8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8d-1Q5R1H8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8d-1Q5R1H8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Mir7071-201ENSMUST00000184847 69 ntBASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav8d-1Q5R1H8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms